Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers
Identifieur interne : 000228 ( Main/Exploration ); précédent : 000227; suivant : 000229Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers
Auteurs : Sangwon Suh ; Young-Sin Kim ; Chang-Yeon Cho ; Mi-Jeong Byun ; Seong-Bok Choi ; Yeoung-Gyu Ko ; Chang Woo Lee [Corée du Sud] ; Kyoung-Sub Jung [Corée du Sud] ; Kyoung Hun Bae [Corée du Sud] ; Jae-Hwan KimSource :
- Asian-Australasian Journal of Animal Sciences [ 1011-2367 ] ; 2014.
Abstract
Four Korean native cattle (KNC) breeds—Hanwoo, Chikso, Heugu, and Jeju black—are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. These results will be useful for conservation and management of KNC breeds as animal genetic resources.
Url:
DOI: 10.5713/ajas.2014.14435
PubMed: 25358313
PubMed Central: 4213698
Affiliations:
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Choi</name></author><author><name sortKey="Ko, Yeoung Gyu" sort="Ko, Yeoung Gyu" uniqKey="Ko Y" first="Yeoung-Gyu" last="Ko">Yeoung-Gyu Ko</name></author><author><name sortKey="Lee, Chang Woo" sort="Lee, Chang Woo" uniqKey="Lee C" first="Chang Woo" last="Lee">Chang Woo Lee</name><affiliation wicri:level="1"><nlm:aff id="af1-ajas-27-11-1548">Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831,<country>Korea</country>.</nlm:aff><country xml:lang="fr">Corée du Sud</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Jung, Kyoung Sub" sort="Jung, Kyoung Sub" uniqKey="Jung K" first="Kyoung-Sub" last="Jung">Kyoung-Sub Jung</name><affiliation wicri:level="1"><nlm:aff id="af2-ajas-27-11-1548">Chungbuk Institute of Livestock and Veterinary Research, Cheongwon, Chungbuk 363-931,<country>Korea</country>.</nlm:aff><country xml:lang="fr">Corée du Sud</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Bae, Kyoung Hun" sort="Bae, Kyoung Hun" uniqKey="Bae K" first="Kyoung Hun" last="Bae">Kyoung Hun Bae</name><affiliation wicri:level="1"><nlm:aff id="af3-ajas-27-11-1548">Jeju Special Self-Governing Province Livestock Promotion, Jeju 690-802,<country>Korea</country>.</nlm:aff><country xml:lang="fr">Corée du Sud</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kim, Jae Hwan" sort="Kim, Jae Hwan" uniqKey="Kim J" first="Jae-Hwan" last="Kim">Jae-Hwan Kim</name></author></analytic><series><title level="j">Asian-Australasian Journal of Animal Sciences</title><idno type="ISSN">1011-2367</idno><idno type="eISSN">1976-5517</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Four Korean native cattle (KNC) breeds—Hanwoo, Chikso, Heugu, and Jeju black—are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. 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uniqKey="Li R">RL Li</name></author><author><name sortKey="Wang, Jh" uniqKey="Wang J">JH Wang</name></author><author><name sortKey="Song, Wt" uniqKey="Song W">WT Song</name></author><author><name sortKey="Xu, Gf" uniqKey="Xu G">GF Xu</name></author><author><name sortKey="Yang, Hj" uniqKey="Yang H">HJ Yang</name></author><author><name sortKey="Luo, Yf" uniqKey="Luo Y">YF Luo</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Corée du Sud</li></country></list><tree><noCountry><name sortKey="Byun, Mi Jeong" sort="Byun, Mi Jeong" uniqKey="Byun M" first="Mi-Jeong" last="Byun">Mi-Jeong Byun</name><name sortKey="Cho, Chang Yeon" sort="Cho, Chang Yeon" uniqKey="Cho C" first="Chang-Yeon" last="Cho">Chang-Yeon Cho</name><name sortKey="Choi, Seong Bok" sort="Choi, Seong Bok" uniqKey="Choi S" first="Seong-Bok" last="Choi">Seong-Bok Choi</name><name sortKey="Kim, Jae Hwan" sort="Kim, Jae Hwan" uniqKey="Kim J" first="Jae-Hwan" last="Kim">Jae-Hwan Kim</name><name sortKey="Kim, Young Sin" sort="Kim, Young Sin" uniqKey="Kim Y" first="Young-Sin" last="Kim">Young-Sin Kim</name><name sortKey="Ko, Yeoung Gyu" sort="Ko, Yeoung Gyu" uniqKey="Ko Y" first="Yeoung-Gyu" last="Ko">Yeoung-Gyu Ko</name><name sortKey="Suh, Sangwon" sort="Suh, Sangwon" uniqKey="Suh S" first="Sangwon" last="Suh">Sangwon Suh</name></noCountry><country name="Corée du Sud"><noRegion><name sortKey="Lee, Chang Woo" sort="Lee, Chang Woo" uniqKey="Lee C" first="Chang Woo" last="Lee">Chang Woo Lee</name></noRegion><name sortKey="Bae, Kyoung Hun" sort="Bae, Kyoung Hun" uniqKey="Bae K" first="Kyoung Hun" last="Bae">Kyoung Hun Bae</name><name sortKey="Jung, Kyoung Sub" sort="Jung, Kyoung Sub" uniqKey="Jung K" first="Kyoung-Sub" last="Jung">Kyoung-Sub Jung</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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